One place where bacteria can be found is on your teeth. This is why it’s so important to brush well. Don’t believe me? Then this experiment is for you. You’ll need to gather your materials and make sure you have a toothbrush and microscope nearby.


This is important because prokaryotes are incredibly common and have a huge impact on our lives.  You may already know some of the ways bacteria can be harmful to you, and this is certainly important information.  Scientists have used knowledge of prokaryotes to create medications, vaccines, and healthy living habits that have led to a healthier life for billions of people.


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Materials:


  • water
  • toothbrush
  • microscope with coverslips and slides

Experiment:


  1. Place a drop of water on a microscope slide.
  2. Gently brush your toothbrush against your teeth and then apply the saliva from the brush to the slide.
  3. Add a cover slip, and observe under the microscope. Draw what you see.

Here’s a short video on a real bacterial colonization of the mouth after only 8 hours of having a cleaning done at the dentist:



If you’ve ever gone to the store to buy toothpaste, you know there many brands. Do any actually do a better job of getting rid of bacteria on your teeth? This is a great question for the scientific method. Here’s what you do:


  1. Brush your teeth really well.
  2. Swab your teeth with a cotton ball and apply to a petrie dish of agar.The next day, brush with a different brand of toothpaste, and again, swab and apply to a different dish.
  3. Repeat for five days with five different brands. Record the growth of bacteria on each dish for each day.
  4. Remember that “day 1” for the first dish will be different than “day 1” for the second dish, and so on.
  5. Which brand left the fewest bacteria? Could there be factors that caused the difference besides toothpaste brand? (Hint: Do you eat the same thing every day?)

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Living things are all around us.  Sometimes the living things we notice the most are animals, whether its birds chirping in the trees, our pet dogs, or even our fellow human beings.  However, most living things are not animals - they include bacteria, archae, fungi, protists, and plants.  These organisms are extremely important to learn about.  They make life possible for animals, including human beings, by keeping soil ready for growth, and providing oxygen for our survival.  No life would be possible without these remarkable organisms.

The prokaryotes, bacteria and archaea represent an amazingly diverse group of organisms only visible when one looks under a microscope. These single-celled organisms obtain energy and reproduce in a variety of ways.

Though some bacteria are harmful, causing disease, many are very helpful, providing the nitrogen we need to live and aiding in digestion. Archaea have been found in some of the most extreme environments on the planets, including environments that are remarkably hot or salty.

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Here are a couple of videos that will give you a few ideas on how to view this amazing world using a compound microscope, UV light, and more. First, we're going to grow our own bacteria, then we'll look how to identify the bacteria already around you.

Grow Your Own Bacteria

Bacteria, both good and bad, are all around. In fact, there are more bacteria in your mouth than people on Earth! See where you can find bacteria in the activity below.

Materials:

  • petri (petrie) dish
  • agar
  • cotton swab
  • sink or bathtub

Experiment:

1. Prepare your petrie dish of agar.
2. Using your cotton ball, swab a certain area of your house. (Think about what areas might have a lot of bacteria.)
3. Rub the swab over the agar with a few gentle strokes before putting the lid back on and sealing the petrie dish.
4. Allow the dish to sit in a warm area for 2 or 3 days.
5. Check the growth of the bacteria each day by making a drawing and describing the changes.
6. Try repeating the process with a new petrie dish and a swab from under your finger nails or between your toes.
7. Throw away the bacteria by wrapping up the petrie dish in old newspaper and placing in the trash. (Don't open the lid.)

 

What's happening?

The agar plate and warm conditions provide the ideal place for bacteria to grow. The bacteria you obtained with the cotton ball grow steadily, becoming visible with the naked eye in a relatively short time. Different samples produce different results. What happened when you took a swab sample from your own body?

Want to grow your own bacteria using a hand-washing kit from Home Science Tools?

Is it safe to wash my hands in water?

When you want a glass of water, where do you usually get it from?  Do you drink bottled water or get it from the tap?  You probably don’t drink from a pond (although people in many countries do.)  Why do we have these different ways of getting water?  Is there anything really different about bottled water, tap water, and lake water?  Let’s find out!

Materials:

  • three different water samples (see experiment below)
  • microscope with slides and coverslips
  • notebook with pencil for sketching

Experiment:

  1. Obtain three water samples – tap water, bottled water, and water from outside.  (The “outside” water could be a stream, lake, or just a puddle.)
  2. Make slides using several drops of each water sample.
  3. Observe the slides under the microscope.
  4. Make drawings of what you see, comparing and contrasting each sample.

 

Is soap better than sanitizer?

In this activity, you will compare the ability of bar soap and hand sanitizer to remove bacteria from your hand.  This is another example of using the scientific method to answer questions and solve problems.

Materials:

  • soap
  • hand sanitizer
  • petri dish
  • agar
  • cotton call or cotton swab

Experiment:

  1. Wash one of your hands with bar soap and clean the other with a hand sanitizer.
  2. Swab each hand with a cotton ball and rub each swab in a Petrie dish with agar.
  3. Place in a warm place and allow to sit for several days.
  4. Compare the bacteria growth in each plate.  Which method of cleaning was more effective?

Learn how well you wash your hands by viewing the germs under a UV light with the Glo Germ kit from Home Science Tools (Do you already have the UV light from Unit 9? Just get the bottle of glow germ gel.)


 

Here are several additional bonus experiments you can do with the rest of the glo gel you have left over!

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Ah-chooo! Influenza (the “flu”) is when you get chills, fever, sore throat, muscle pains, headaches, coughing, and feel like all you want to do is lie in bed. The flu is often confused with the common cold, but it’s a totally different (and more severe) virus.


The flu is passed from person to person (or animals or birds) by coughing or sneezing. With plants, it’s transmitted through the sap via insects. In the case of birds and animals, the flu is usually transmitted by touching their droppings, which is why hand-washing is so important! In addition to soap, the flu virus can be inactivated by sunlight, disinfectants and detergents.


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A virus can only replicate inside the living cells of organisms, and most are way too small to be viewed through a microscope. Viruses can infect organisms, animals, plants, bacteria and archaea. Virus particles (virions) are made up of two or three parts, including the genetic material (from either DNA or RNA), long molecules which bring genetic information, and a special coat that protects the genes.


Viruses can be helical or complex structures, but they are a lot smaller than bacteria usually by about a hundredth.



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Birds, people, plants, and microscopic organisms need to know where they are as well as where they want to be. Birds migrate each year and know which way is south, and plants detect the sun so they can angle their leaves properly. People consult a map or GPS to figure out where they are.


Magnetotactic bacteria orients itself along magnetic field lines, whether from a nearby magnet or the Earth’s magnetic field. It’s like having a built-in internal compass.


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Discovered in 1975, scientists noticed that certain bacteria seemed to move to the same side of the microscope slide. After placing a magnet near the slide, they were able to determine these bacteria contain tiny bits of iron (magnetic crystals, to be exact). The bacteria place the iron (which act like magnets) in a line to make one long magnet, and use this magnet to align to the earth’s magnetic field, just like a compass.


Bacteria move away from oxygen and toward areas with low (or no) oxygen. In water, oxygen levels decrease with depth, so you’ll find magnetotactic bacteria in the deeper parts. These bacteria use their internal compass to figure out which way is deeper.


Since the Earth’s geomagnetic north pole actually points at an angle, the “north-seeking” bacteria aligned to the field lines are also pointing down. When the bacteria move north along the field lines, they are moving into deeper water (with less oxygen). On the flip side (Southern Hemisphere), magnetotactic bacteria must be “south-seeking” in order to go deeper. Of course, at the equator, there’s a mixture of north-seeking and south-seeking bacteria.



Since the magnetic crystals are found in the organisms, even dead cells will align themselves!


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All living things need a way to get energy. Bacteria get their food and energy in many ways. Some bacteria can make food on their own, while others need other organisms.


Some bacteria help other living things as they get energy, others hurt them while they get energy, and still others have no affect on living things at all.
Some living things, or organisms, are able to make their own food in a process called photosynthesis.


In this process, the organism turns energy from the sun into energy that can be used for energy. Organisms that get their energy from photosynthesis are called autotrophs. Some bacteria get their energy this way.


Some bacteria, called chemotrophs, get their energy by breaking down chemical compounds in the environment, including ammonia. Breaking down ammonia is important because ammonia contains the element nitrogen.


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All organisms need nitrogen to survive, and the nitrogen released by bacteria is crucial to these living things’ survival. Clearly, chemotrophs are very important and beneficial to other living things. Living things that cannot get their energy through photosynthesis or from breaking down chemical compounds have to get their energy from other living things. Some bacteria, called decomposers, get their energy by breaking down dead organisms or waste products into simple nutrients and energy.


Pseudomonas bacteria are decomposers found in the soil, where they recycle dead plant material. The last groups of bacteria get energy from organisms that are still alive, and depend on these organisms to survive.
Mutualistic bacteria get their energy in ways that help another organism. For example, some bacteria live in the roots of legumes, including pea plants. The bacteria make the nitrogen the pea plants need and the pea plants provide a place for the bacteria to live. Other bacteria, called parasitic bacteria, hurt the organism they are getting help from. For example, some bacteria cause illness. We will talk about ways bacteria can be helpful or harmful a little later.



All living things reproduce. This is the only way to ensure the organisms continued survival. Bacteria reproduce asexually. This means that a single “parent” organism produces offspring on their own. In the case of bacteria, a process called binary fission is used. In binary fission, the DNA in the nuceleoid region and plasmids double, and the bacterium splits into two identical copies. If everything happens the way it’s supposed to, the two new bacteria will be identical to the original bacterium. These bacteria can then split again to increase the number of bacteria in the population. Through binary fission, bacteria reproduce very quickly. Some populations can double their size in less than ten minutes!


How to Grow Your Own Bacteria

Although we often think of bacteria as things that cause disease, some bacteria are very helpful. In fact, if you like to eat yogurt, you are eating helpful bacteria all the time! See for yourself in these two activities:


Materials:


  • clean plastic cup
  • yogurt
  • dropper or toothpick
  • microscope with slides and coverslips
  1. Place a very small portion of plain yogurt onto the slide, and add one drop of water. Place the coverslip on top.
  2. Under low power, find a section where the yogurt is pretty thin; this is where you will find the bacteria.
  3. Switch to high power (400X for most microscopes) for a better view of the bacteria.
  4.  Make a sketch of your view under different magnifications.

Finding Bacteria in Yogurt

Materials:


  • clean plastic cup
  • yogurt
  • toothpick
  • water
  • microscope with slides and coverslips
  1. Clean a small plastic cup. Make sure ALL soap is completely rinsed off.
  2. Put a small amount of yogurt in the cup, and put it aside in a dark, relatively warm area. Leave undisturbed for at least 24 hours.
  3. After the time has past, take a small sample with a toothpick and place on a slide. If the sample seems too thick, dilute with a drop of water. Next, place a cover slip on top.
  4. First observe the bacteria at low power 100X to find a good place to start looking. The diaphragm setting should be very low (small) because these bacteria are nearly transparent.
  5. Switch into the highest power to identify the bacteria according to arrangement.
  6. From here you can identify any bacteria you might find. For example, a common inhabitant of yogurt is a paired, round bacteria or diplococcus (see list below)
  7. Did you observe more bacteria in part 1 or 2? Why do you think this is?
  8. Do you want to take it a step further? Think about all the kinds of yogurt out there. There are different flavors, different brands, some that are non-fat, and much more. Do some types have more bacteria than others? This is a great question to investigate using the scientific method. So come up with a specific question, write a hypothesis, grab some yogurt, and get experimenting!

Bacteria are classified as follows:

First observe the way the bacteria are arranged:


  • paired = diploe
  • chained = streptose
  • clusters = staphyle

Next observe the shape of the bacteria:


  • round = coccus
  • rod = bacillus
  • spiral = spirillum

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Bacteria have a bad reputation. Walk down the cleaning aisle of any store and you’ll see rows and rows of products promising to kill them. There are definitely some bacteria that cause problems for people, and we’ll talk about them soon, but we are going to start off positive, and talk about the many ways bacteria can be helpful.


First, decomposers help control waste. Without these bacteria, the amount of waste in soil would quickly make the soil a place where nothing could grow. Bacteria are even used in sewage treatment plants to treat our waste. Decomposers also help provide organisms with nitrogen, as was discussed earlier.


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Bacteria also have an important role in the foods we eat. Yogurt and some cheeses are made from using bacteria to ferment milk, and sauerkraut is made from using bacteria to ferment cabbage.


Once we’ve eaten, bacteria continue to help us. Bacteria line the digestive tract and help us digest food. In your gut, the number of bacteria cells is greater than the number of your own cells.


In science labs, researchers have found ways to use bacteria to produce medicines. For example, some people with the disease diabetes need insulin. Mass-produced insulin, made possible by bacteria, has lowered the cost of insulin for people suffering from this disease.


Researchers from Japan’s National Institute of Advanced Industrial Science and Technology (AIST) have figured out a way to get motion from bacteria. This team of scientists have developed a motor that is powered by bacteria movement.


Because this motor is so small (it’s only 20-microns across, where 1 micron = 1 millionth of a meter), we’ve posted a picture (above) so you can see the six revolving motor blades. Each blade has a tab that sits in a circular groove area, which is treated with a substance that makes the bacteria move only in one direction. As the bacteria moves, they push the tabs (which spins the motor). This is a great way to get power for tiny devices, such as tiny pumps inside medical devices.



What is true about bacteria is that they are made of only a single cell, are prokaryotes, and are very common. They are the most common living things on Earth. In fact, there are more bacteria living in the mouth of a single person than there are people on the planet!


Since bacteria are made of only one cell, they are very cell. The only way to see bacteria is to look at them in a microscope. When you look at bacteria in a microscope, they usually have one of three shapes.


Bacilli are shaped like rods, cocci are shaped like spheres, and spirilli are shaped like spirals. Using shapes to describe bacteria helps scientists but bacteria into groups, which is often called classification.


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When you hear the word “bacteria” what do you think of? If you’re like most people, you probably think of things that can make you sick. Although some bacteria do make us sick, this is not true for all of them. In fact, as we’ll see a little later, some bacteria are very helpful.


Did you know that bacteria can have a virus? It’s true! But first, you might be wondering: what’s the difference between viruses and bacteria?


Bacteria grows and reproduces on its own, while viruses cannot exist or reproduce without being in a living cell of a plant, animal, or even bacteria. Size-wise, bacteria are enormous.


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The T4 bacteriophage is a virus that looks like a spaceship from an alien planet. It attaches to the surface of the Escherichia coli (E. coli) bacteria using its six legs and injects DNA into the bacteria. The DNA then tells the bacteria to multiply and essentially fill the bacterial cell to bursting. This is how the T4 kills E. coli.


In this video below, you’ll first see large E. coli bacteria floating around, one of which is attacked by a T4 bacteriophage. Notice how the T4 injects the DNA strand into the bacterium. (What’s not shown is how it bursts, but we’ll leave that to your imagination!)



Some bacteria are responsible for diseases in humans and other organisms. Strep throat, tuberculosis, and pneumonia are all the result of bacteria.


Bacteria can also be responsible for food poisoning. Raw eggs and undercooked meats can contain bacteria that can cause digestive problems. One simple step everyone can take to reduce these kinds problems is washing your hands before cooking or eating. Cleaning cooking surfaces and fully cooking food can also help.


In 2007 the United States Food and Drug Administration (FDA) approved using bacteriophages on all food products. Other places you’ll find bacteriophages are in hospitals, uniforms, sutures and surgery surfaces where it’s important to keep surfaces very clean.


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Can your spit glow? Let’s hope not – because if it did, you’d have eaten fish contaminated by photobacteria!


Photobacteria are comma-shaped bacteria that have the property bioluminescence.  This means that they give off light, usuafishlly a blue or green.  There are about 15 species of bacteria that fall into this group.  Photobacteria generally live in the ocean, where they survive off of sodium.  Remember that salt, or sodium chloride, is made of the elements sodium and chlorine, so the salt water of the ocean is a good place to find sodium.  These organisms appear to be clear under normal circumstances.


Photobacteria sometimes are found alone, and other times are found in large colonies.  Their most distinctive quality, that of bioluminescence, is triggered by autoinducers.  Autoinducers are molecules that signal the production of certain chemicals (in this case chemicals that lead to the release of light) in bacteria.  In photobacteria, autoinducers are related to the density of the bacteria.  In other words, the more bacteria present, the more of an impact the autoinducers will have.  For this reason, it is only when they are in large colonies to the bacteria give off light.


Photobacteria can have relationships with fish that can be positive, neutral, or negative for the fish.  Some photobacteria help fish by providing them light organs.  Other times, the bacteria are found on the intestines of fish, really not affecting things one way or the other.  Some photobacteria are pathogens, which means they can cause disease in fish.  Yellowfin tuna, striped bass, and white carp are especially at risk for the diseases caused by photobacteria.  So, although humans are not directly at risk from these diseases, they can indirectly be affected when the fish many people rely on for food become sick.  Additionally, dying fish can lead to the loss of a great amount of money when fishermen are no longer able to catch as many fish as they were previously.  A great deal of research has been done trying to find ways to control photobacteria populations.


Let’s see how much you’ve picked up with these experiments and the reading – answer as best as you can. (No peeking at the answers until you’re done!) Just relax and see what jumps to mind when you read the question. You can also print these out and jot down your answers in your science notebook.


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  1. What do we call cells without nuclei?
  2. How many cells are bacteria made of?
  3. What is the difference between spirilla, bacilli, and cocci bacteria?
  4. How is a bacterium’s cell wall like your skin?
  5. How does penicillin work?
  6. What do ribosomes do?
  7. Where is DNA usually found in prokaryotes?
  8. How do autotrophs get the energy they need to survive?
  9. What is a chemotroph?
  10. How do bacteria that are chemotrophs help other organisms?
  11. How are mutualistic and parasitic bacteria similar?  How are they different?
  12. What process do bacteria use to reproduce?
  13. How do decomposer bacteria help other organisms?
  14. Name three foods made using bacteria.
  15. What are three ways to reduce the risk of food poisoning from bacteria?
  16. Name three ways archaea are similar to bacteria.
  17. How is the cells wall of archaea different than the cell walls of bacteria?
  18. How do most archaea get energy?
  19. What is one way archaea help other organisms?
  20. Why is budding considered asexual reproduction?
  21. What are some places thermophiles live?
  22. Why did scientists think for many years that nothing could live in the Dead Sea?
  23. How do some methanogens help cows?
  24. Why would a scientist studying global warming be interested in swamps where methanogens are found?
  25. Name two “non-extreme” places where archaea are found.

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Let’s see how you did! If you didn’t get a few of these, don’t let it stress you out – it just means you need to play with more experiments in this area. We’re all works in progress, and we have our entire lifetime to puzzle together the mysteries of the universe!


Here’s printer-friendly versions of the exercises and answers for you to print out: Simply click here for printable questions and answers.


Answers:
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  1. What do we call cells without nuclei? prokaryotes
  2. How many cells are bacteria made of? 1
  3. What is the difference between spirilla, bacilli, and cocci bacteria? They each have a different shape
  4. How is a bacterium’s cell wall like your skin? They both provide protection from outside objects
  5. How does penicillin work? It destroys the proteins that make bacteria’s cell walls
  6. What do ribosomes do? Make proteins
  7. Where is DNA usually found in prokaryotes? Either in the nucleoid region or in plasmids
  8. How do autotrophs get the energy they need to survive? They convert the sun’s energy into energy they can use
  9. What is a chemotroph? An organism that gets energy by breaking down chemical compounds
  10. How do bacteria that are chemotrophs help other organisms? Some of the elements broken down, including nitrogen, are needed for other organisms to survive
  11. How are mutualistic and parasitic bacteria similar?  How are they different? Both mutualistic and parasitic bacteria live in other organisms, but the mutualistic bacterium is helpful while the parasitic bacterium is harmful
  12. What process do bacteria use to reproduce? Binary fission
  13. How do decomposer bacteria help other organisms? They remove dead material from soil
  14. Name three foods made using bacteria. Yogurt, cheese, sauerkraut
  15. What are three ways to reduce the risk of food poisoning from bacteria? Wash your hands, clean down cooking surfaces, fully cook meat and eggs
  16. Name three ways archaea are similar to bacteria. They are microscopic single-celled prokaryotes
  17. How is the cells wall of archaea different than the cell walls of bacteria? They are made of a different protein
  18. How do most archaea get energy? From breaking down chemicals (they are chemotrophs)
  19. What is one way archaea help other organisms? They provide chemicals needed for life and help in digestion
  20. Why is budding considered asexual reproduction? It involves only a single parent
  21. What are some places thermophiles live? Geysers, hot springs, near volcanoes
  22. Why did scientists think for many years that nothing could live in the Dead Sea? They thought it was too salty
  23. How do some methanogens help cows? They live in their gut and break down cellulose, which is found in the plants the cows eat
  24. Why would a scientist studying global warming be interested in swamps where methanogens are found? Methanogens produce methane, which is a greenhouse gas and causes global warming
  25. Name two “non-extreme” places where archaea are found. In the ocean amongst plankton and in soil

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